Tuesday, August 27, 2013

E2 Elimination

Elimination reaction in Organic Compounds involves the removal of certain groups from the reactant molecule usually leading to the formation of an unsaturated compound as a product.

For example the reaction between an alcohol and a mineral acid at high temperature is an elimination reaction leading to formation of an alkene along with the elimination of a molecule of water.



The elimination reaction between an alkyl halide and a base that leads to the formation of an alkene can follow three major pathways. They are named E1, E2 and E1CB. In the name E stands for elimination (as expected) and the numbers 1 and 2 stand for unimolecular and bimolecular respectively. In E1CB, CB stands for conjugate base.



As we see in the above example, atoms from adjacent carbon atoms are removed; E1 and E2 reactions are often referred to as beta-elimination.

Let us talk about the elimination reaction through E2 mechanism.

Elimination reaction through E2 mechanism is a concerted reaction i.e. the reaction happens in a single step. Both the base and the alkyl halide take part in that step. As this reaction happens in only one step that step is the rate determining step and as both the base and the alkyl halide are involved in the rate determining step, the rate of the reaction will depend on the concentrations of both the alkyl halide and the base. So, this reaction is a second order reaction.

The mechanism of E2 elimination is shown below.



The base abstracts the hydrogen in the beta position to the leaving group and starts the reaction. At the same time a pi-bond is formed between the adjacent carbon atoms and also the halide is eliminated. A bond between the base and the hydrogen starts forming; the bond between the hydrogen and carbon starts breaking; a pi-bond between the adjacent carbon atoms start forming; the bond between the carbon and halogen starts breaking. This reaction goes through a transition state in which the bonds that start breaking become weaker and weaker and eventually break completely while the bonds that start forming become stronger and stronger and eventually become completely formed bonds.

The transition state of the reaction is shown below (the dotted lines represent a bond that is either being formed or being broken).



There are three important things related to a E2 elimination reaction.

1. The beta – hydrogen and the halogen should be on the same plane.

As seen in the mechanism a pi-bond is formed between two adjacent carbon atoms during the reaction at the same time when the C – H bond and C – Br bond are breaking. A pi-bond is formed by the sideways overlap of two p-orbitals. For maximum overlap and thereby form a strong bond both the p-orbitals should be parallel to each other on the same plane. So, the beta-hydrogen and the halogen should be on the same plane. This is necessary because the sp3 orbital of the carbon bonded to the hydrogen and the sp3 orbital of the carbon bonded to the halogen become the p-orbitals that overlap to form the pi-bond.

2. The beta-hydrogen and the halogen should preferably be anti-coplanar

Not only the beta-hydrogen and the halogen should be on the same plane they should preferably be anti (opposite sides) to each other than syn (same side). If elimination happens in anti-coplanar conformation it is called anti-elimination. This is necessary to avoid steric and electronic repulsions in the transition state which increase the energy of the transition state. The rate of the reaction depends on the energy of the transition state. The higher the energy of the transition state the difficult it is for it to be formed and slower the rate of the reaction. Any factor increasing the energy of the transition state will slow the reaction down. However, in molecules where the beta-hydrogen and the halogen are syn-coplanar due to the geometry of the molecule, syn-elimination happens.





3. More substituted alkene is formed as the major elimination product

The stability of an alkene depends on the number of alkyl substitutions present on the carbon atoms forming the pi-bond or more precisely, more the number of alpha-hydrogens on an alkene more stable it will become due to hypeconjugation. During elimination reactions, the substrates may have two different sets of beta-hydrogens, one leading to the formation of less susbtituted alkene and one leading to the formation of more substituted alkene. The more substituted alkene is formed as the major product as it is more stable. The product of the E2 elimination reaction resembles the transition state from which it is formed. The transition state leading to a more substituted alkene will be less energetic than the transition state leading to a less substituted alkene.



Apart from the three things mentioned above there are other interesting features too of E2 elimination such as the stereochemical outcome, competition with E1 and SN2 reactions etc.

Thursday, August 22, 2013

Paracetamol

Paracetamol is a common analgesic and antipyretic drug. It can be purchased over the counter of any medical store without a prescription from a doctor. It is harmless when used at recommended doses (up to 4g / day for adults) and may cause severe damages to liver when consumed in quantities more than recommended. That is why it is not recommended to consume paracetamol without the advise of a doctor.

The molecule shown below is known as acetaminophen and also as paracetamol. Both of the names are derived from its common chemical name para-acetylaminophenol. Its IUPAC Name is N-(4-hydroxyphenyl)acetamide.



Paracetamol can be prepared by nitrating phenol with a mixture of dilute H2SO4 and NaNO3. The nitrogroup is then reduced to amino group and then acylated with acetic anhydride. The scheme of preparation is shown below.

Wednesday, August 7, 2013

Neighbouring Group Participation

Neighbouring Group Participation (NGP) is observed in nucleophilic substitution reactions, where a neighbouring group helps in the removal of the leaving group to form a reactive intermediate that leads to the formation of the product. Increase in the reaction rate and unexpected stereo chemical outcomes are associated in reactions involving NGP.

An atom having an unshared pair of electrons and also present at least beta to the leaving group can act as a neighbouring group. Also, NGP is mostly observed on solvolysis reactions where the solvent acts as the nucleophile.

A typical reaction involving NGP is shown below.



During NGP, the neighbouring group (G) attacks the electrophilic centre to eliminate the leaving group (L). This leads to the formation of a cyclic intermediate which is very reactive. This is called anchimeric assistance from the neighbouring group.

The nucleophile (Nu-)then attacks this intermediate to form the product. If the attack happens of the carbon that was having the leaving group the configuration will be retained because the configuration at that carbon will be inverted twice.

Groups like halides, hydroxides, ethers, thio ethers, amino groups, carboxylates, phenyl group, pi-bonds etc. have been indentified to act as neighbouring groups in many reactions.

Some more examples of reaction involving NGP are shown below.

Monday, August 5, 2013

Limiting Reagent

If we react 1g of Ca with 1g of Cl2, how many grams of CaCl2 will be formed as per the following equation?

Ca + Cl2 → CaCl2

Using the Law of Conservation of Mass we can say that the total weight of the reactants is 2g and hence the weight of the product (CaCl2) should also be 2g. But, only a little more than 1.5g of the product is formed. Why?

According to the Law of Conservation of Mass, the mass of the reactants should be equal to the mass of the products if all the reactants are consumed in the reaction. The catch is we will be able to us the Law of Conservation of Mass only if all the reactants take part in the reaction.

What if all the reactants are not consumed in the reaction? This brings in the concept of "Limiting Reagent".

Limiting Reagent in a reaction is that reactant that limits the amount of product that can be formed. The reaction will not proceed forward when this reactant is consumed completely. The other reactants may be left unreacted in the reaction mixture.

Let us take the example of an imaginary bicycle company to understand this. A bicycle has many parts. Some of them are the two wheels, the frame, the pedals, the tires, the handle bars, the brake shoes and the seat. This bicycle company has many independent units manufacturing these different parts that are needed to assemble one complete bicycle. Say, the wheel unit makes 1000 wheels in a day, the frame unit makes 1200 frames a day, the tire unit makes 1000 tires a day, the handle bar unit makes 2000 a day, the brake shoe unit makes 5000 a day and the seat unit makes 1 seat a day. How many complete bicycles can this company send out in a day? The answer is 1. Irrespective of the number of other parts manufactured, the cycle will not be complete without the seat, which is manufactured 1 a day.

Similarly, that reactant that brings less than required number of moles (or mass) for a reaction will be the limiting reagent.

Let us now get back to our question. According to the balanced equation, 1 mole of Ca will react with 1 mole of Cl2 and give 1 mole of CaCl2.

We have 1g of Ca which is (140) mole and 1g of Cl2 which is (171) mole.

(171) is less than (140) numerically.

This means that there is not enough Cl2 molecules to react with all the Ca atoms present. Hence, Cl2 is the "Limiting Reagent" in this reaction.

Now that we have identified the Limiting Reagent in this reaction, we will now base all our calculations on the weight or the number of moles of the Limiting Reagent.

According to the balanced equation, 1 mole of Cl2 gives 1 mole of CaCl2.

So, (171) mole of Cl2 will produce (171) mole of CaCl2.

The weight of CaCl2 produced thus will be (171 * 111) = 1.56g

Also, (171) mole of Cl2 will react only with (171) mole of Ca.

So, the mole of Ca left unreacted will be (140) - (171) = 0.011 mole.

Hence the weight the Ca left unreacted will be (0.011 * 40) = 0.44g

We will now be left with 1.56g of CaCl2 and 0.44g of unreacted Ca, the sum of which is the 2g of reactants taken.

So, if any of the reactant is left unreacted in a reaction, the total of the weight of the products formed and the weight of the reactant left unreacted will be equal to the weight of the reactants taken at the beginning for the reaction.

Saturday, August 3, 2013

Laws in Chemistry

Following are some of the Laws in Chemistry.
  • Avogardo's Law
  • Boyle's Law
  • Charle's Law
  • Dalton's Law
  • Dulong Petit's Law
  • Faraday's Law
  • Gay Lussac's Law
  • Graham's Law
  • Henry's Law
  • Ideal Gas Law
  • Law of Conservation of Mass
  • Law of Definite Proportions
  • Law of Multiple Proportions
  • Laws of Thermodynamics
  • Periodic Law

Law of Conservation of Mass

The Law of Conservation of Mass states the following;
"Mass can neither be created nor destroyed"
In simple words the weight of the reactants are always equal to the weight of the products if all reactants are consumed in the reaction.

Law of Conservation of Mass was introduced by Antoine Lavoisier in around 1789. He had conducted many experiments especially of combustion reactions in closed containers to validate the rule.

In Stoichiometry we use the Law of conservation of mass to calculate various quantities, be it the amount of product expected or the amount of reactant needed to be added to a reaction or the percent yield of a reaction.

Let us take an example;

CaCO3 on thermal decomposition produces CaO and CO2.

CaCO3 → CaO + CO2

On complete decomposition of 100g of CaCO3 produced 56g of CaO and 44g of CO2  The total weight of the reactants is equal to the total weight of the products.

As in the previous case, if we start with 50g of CaCO3 and allow it to decompose completely we should get 28g of CaO and 22g of CO2.

Try to solve the following question in the fastest time possible.

If 70g of CaCO3 on complete decomposition produces 39.2g of CaO, how many grams of CO2 will be produced?

How much time did you take? How did you arrive at the answer?

According to the Law of Conservation of mass, the weight of the products (CaO and CO2  formed should be equal to the weight of the reactant (CaCO3). So, the total weight of CaO and CO2 should be 70g. 39.2g of CaO is formed and hence (70 - 39.2)g = 30.8g of CO2 will be produced.

A 100g sample of CaCO3 on thermal decomposition gives 40g of CaO. What can we infer from this?

We can infer either of the following two things.
1. The reaction is incomplete and
2. The sample is impure.

Let us say that the reaction is complete. This leaves us with the only option that the sample must have been impure. What must be the percentage purity of the sample? Let us calculate.

We know that, 100g of pure CaCO3 on complete decomposition should produce 56g of CaO. Or in other words we can say that 56g of CaO should have been produced from 100g of pure CaCO3. So, 40g of CaO must have been produced from [(100/56) * 40]g = 71.43g of CaCO3. Hence the sample must be 71.43% pure.

What if the reactants did not completely react? How will we be able to calculate the amount of products formed and also the amount of reactants reacted?

The above questions can be answered by using the concept of "Limiting Reagent". We shall discuss about it next.